STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_1667Hypothetical protein. (195 aa)    
Predicted Functional Partners:
rpmA
Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
   
 
 0.984
rplS
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
   
 
 0.980
rplO
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
   
   0.973
rpmF
Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
   
   0.970
TW91_0045
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.954
rpmJ
Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
  
   0.954
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
   
   0.953
rpsI
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
   0.953
rpsP
Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
   
   0.953
rpmG
Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
   
   0.951
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.