STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_1729Hypothetical protein. (142 aa)    
Predicted Functional Partners:
TW91_0436
Cytochrome c assembly family protein.
  
     0.721
TW91_0616
Putative inner membrane protein.
  
     0.720
TW91_1739
O-antigen polymerase family protein.
  
     0.685
greA
Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.
       0.629
TW91_1715
Hemerythrin HHE cation binding domain protein.
  
     0.606
TW91_1143
Periplasmic protein.
  
     0.603
TW91_1258
Putative membrane protein.
  
     0.544
CcsB
Putative membrane protein.
  
     0.538
TW91_0374
Inner membrane protein.
  
     0.509
TW91_0912
Cytochrome c5.
  
     0.476
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.