STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_1764TspA protein. (489 aa)    
Predicted Functional Partners:
TW91_1763
TspA protein.
      0.788
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
    0.627
PilW
Type IV pilus biogenesis/stability protein PilW.
  
   
 0.593
TW91_0400
Pilus assembly protein.
  
    0.583
TW91_0399
Pilus assembly protein, PilO.
  
  
 0.577
TW91_0398
Pilus assembly protein PilP.
  
    0.547
TW91_0226
LysM domain protein.
  
   
 0.513
TW91_1408
Pilus biogenesis protein.
  
     0.505
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.468
TW91_0998
Two component sensor kinase.
  
     0.463
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.