Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TW91_1773Hypothetical protein. (164 aa)    
Predicted Functional Partners:
TW91_1772
Putative membrane protein.
 
  
 0.982
TW91_1770
Copper-binding periplasmic protein.
 
  
 0.980
TW91_1771
Copper transport ATP-binding protein NosF.
 
  
 0.957
TW91_1767
Regulatory protein NosR.
 
  
 0.933
TW91_1774
Tat pathway signal sequence; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
   
 0.892
TW91_1768
Nitrous-oxide reductase.
 
  
 0.883
TW91_1925
Tat pathway signal sequence domain protein.
  
     0.471
TW91_1037
Putative integral membrane protein.
 
     0.441
TW91_1769
Hypothetical protein.
       0.433
BamC
Lipoprotein.
      
 0.425
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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