Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TW91_1790TolC protein. (480 aa)    
Predicted Functional Partners:
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.987
TW91_1792
Auxiliary transport protein, membrane fusion protein family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.932
TW91_1463
Acriflavine resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.820
TW91_1464
AcrB protein.
 
 0.803
TW91_0559
Multidrug resistance protein A.
 
 
 0.778
TW91_1392
Type I secretion membrane fusion protein.
  
 
 0.521
TW91_1789
Inner membrane protein.
       0.512
TW91_1013
Ferripyoverdine receptor.
  
    0.443
TW91_1127
TonB-dependent receptor protein.
  
   0.440
TW91_0561
Multidrug resistance protein Y; Belongs to the major facilitator superfamily.
 
   0.425
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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