TW91_1870 protein (Neisseria flavescens) - STRING interaction network

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Score

TW91_1870

Cold-shock DNA-binding domain protein. (169 aa)

Predicted Functional Partners:

msrA

0.584

TW91_1349

0.489

TW91_1918

0.489

TW91_1869

0.472

rpsL

0.458

rpsQ

0.448

rplT

0.444

rplW

0.439

rpmC

0.424

rpsS

0.420

Your Current Organism:

Neisseria flavescens

NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TW91_1349	TW91_1870	TW91_1349	TW91_1870	Dead/deah box helicase; Belongs to the DEAD box helicase family.	Cold-shock DNA-binding domain protein.	0.489
TW91_1349	rplW	TW91_1349	TW91_0025	Dead/deah box helicase; Belongs to the DEAD box helicase family.	Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.703
TW91_1349	rpmC	TW91_1349	TW91_0031	Dead/deah box helicase; Belongs to the DEAD box helicase family.	Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.528
TW91_1349	rpsQ	TW91_1349	TW91_0032	Dead/deah box helicase; Belongs to the DEAD box helicase family.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.425
TW91_1869	TW91_1870	TW91_1869	TW91_1870	Glycosyl transferase.	Cold-shock DNA-binding domain protein.	0.472
TW91_1870	TW91_1349	TW91_1870	TW91_1349	Cold-shock DNA-binding domain protein.	Dead/deah box helicase; Belongs to the DEAD box helicase family.	0.489
TW91_1870	TW91_1869	TW91_1870	TW91_1869	Cold-shock DNA-binding domain protein.	Glycosyl transferase.	0.472
TW91_1870	TW91_1918	TW91_1870	TW91_1918	Cold-shock DNA-binding domain protein.	Dead/deah box helicase; Belongs to the DEAD box helicase family.	0.489
TW91_1870	msrA	TW91_1870	TW91_0673	Cold-shock DNA-binding domain protein.	Peptide methionine sulfoxide reductase MsrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.	0.584
TW91_1870	rplT	TW91_1870	TW91_1810	Cold-shock DNA-binding domain protein.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.444
TW91_1870	rplW	TW91_1870	TW91_0025	Cold-shock DNA-binding domain protein.	Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.439
TW91_1870	rpmC	TW91_1870	TW91_0031	Cold-shock DNA-binding domain protein.	Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.424
TW91_1870	rpsL	TW91_1870	TW91_0771	Cold-shock DNA-binding domain protein.	Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.458
TW91_1870	rpsQ	TW91_1870	TW91_0032	Cold-shock DNA-binding domain protein.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.448
TW91_1870	rpsS	TW91_1870	TW91_0027	Cold-shock DNA-binding domain protein.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.420
TW91_1918	TW91_1870	TW91_1918	TW91_1870	Dead/deah box helicase; Belongs to the DEAD box helicase family.	Cold-shock DNA-binding domain protein.	0.489
TW91_1918	rplW	TW91_1918	TW91_0025	Dead/deah box helicase; Belongs to the DEAD box helicase family.	Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.703
TW91_1918	rpmC	TW91_1918	TW91_0031	Dead/deah box helicase; Belongs to the DEAD box helicase family.	Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.528
TW91_1918	rpsQ	TW91_1918	TW91_0032	Dead/deah box helicase; Belongs to the DEAD box helicase family.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.425
msrA	TW91_1870	TW91_0673	TW91_1870	Peptide methionine sulfoxide reductase MsrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.	Cold-shock DNA-binding domain protein.	0.584