Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TW91_2044Mg chelatase family protein. (498 aa)    
Predicted Functional Partners:
TW91_0074
Competence protein.
 
  
 0.837
DprA
DNA protecting protein DprA.
 
 
 0.827
TW91_2043
Hypothetical protein.
       0.785
TW91_1107
Hypothetical protein; Belongs to the UPF0102 family.
 
    0.703
TW91_1497
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.623
TW91_1498
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.545
msrA
Peptide methionine sulfoxide reductase MsrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.487
TW91_2045
Hypothetical protein.
       0.479
TW91_2046
Hypothetical protein.
       0.479
TW91_2047
Thiol:disulfide interchange protein DsbA.
       0.473
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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