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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THA_10074-alpha-glucanotransferase. (455 aa)    
Predicted Functional Partners:
pulA
Pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
 
 0.983
glgX
Glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
 
0.949
THA_70
Glycogen phosphorylase, muscle form; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.933
THA_1818
Alpha-glucosidase 2; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.929
THA_1915
Maltodextrin glucosidase.
  
  
 
0.927
THA_949
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
  
 
0.919
THA_522
Glycoside hydrolase, family 57; Belongs to the glycosyl hydrolase 57 family.
     
 0.909
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
     
 0.807
THA_1006
Phosphodiesterase, family.
       0.805
THA_687
Maltose ABC transporter, periplasmic maltose-binding protein.
 
  
 0.528
Your Current Organism:
Thermosipho africanus
NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B
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