Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
THA_1009 | THA_1010 | Metyl-accepting chemotaxis protein. | Integrase, catalytic region. | 0.741 |
THA_1009 | THA_1011 | Metyl-accepting chemotaxis protein. | Membrane associated methyl-accepting chemotaxis protein, putative. | 0.966 |
THA_1009 | THA_1109 | Metyl-accepting chemotaxis protein. | Cyclic diguanylate phosphodiesterase (EAL) domain protein. | 0.677 |
THA_1009 | THA_1190 | Metyl-accepting chemotaxis protein. | Chemotaxis protein CheA. | 0.885 |
THA_1009 | THA_1191 | Metyl-accepting chemotaxis protein. | Chemotaxis protein CheW. | 0.847 |
THA_1009 | THA_1452 | Metyl-accepting chemotaxis protein. | CheA signal transduction histidine kinase, putative. | 0.969 |
THA_1009 | THA_1640 | Metyl-accepting chemotaxis protein. | Flagellar motor switch phosphatase FliY. | 0.575 |
THA_1009 | THA_2030 | Metyl-accepting chemotaxis protein. | Transposase repeat family ISCc3. | 0.741 |
THA_1009 | THA_515 | Metyl-accepting chemotaxis protein. | Purine-binding chemotaxis protein. | 0.877 |
THA_1010 | THA_1009 | Integrase, catalytic region. | Metyl-accepting chemotaxis protein. | 0.741 |
THA_1010 | THA_1011 | Integrase, catalytic region. | Membrane associated methyl-accepting chemotaxis protein, putative. | 0.642 |
THA_1010 | THA_2030 | Integrase, catalytic region. | Transposase repeat family ISCc3. | 0.786 |
THA_1011 | THA_1009 | Membrane associated methyl-accepting chemotaxis protein, putative. | Metyl-accepting chemotaxis protein. | 0.966 |
THA_1011 | THA_1010 | Membrane associated methyl-accepting chemotaxis protein, putative. | Integrase, catalytic region. | 0.642 |
THA_1011 | THA_1109 | Membrane associated methyl-accepting chemotaxis protein, putative. | Cyclic diguanylate phosphodiesterase (EAL) domain protein. | 0.634 |
THA_1011 | THA_1190 | Membrane associated methyl-accepting chemotaxis protein, putative. | Chemotaxis protein CheA. | 0.515 |
THA_1011 | THA_1191 | Membrane associated methyl-accepting chemotaxis protein, putative. | Chemotaxis protein CheW. | 0.505 |
THA_1011 | THA_1452 | Membrane associated methyl-accepting chemotaxis protein, putative. | CheA signal transduction histidine kinase, putative. | 0.885 |
THA_1011 | THA_1640 | Membrane associated methyl-accepting chemotaxis protein, putative. | Flagellar motor switch phosphatase FliY. | 0.576 |
THA_1011 | THA_1889 | Membrane associated methyl-accepting chemotaxis protein, putative. | Conserved hypothetical protein. | 0.539 |
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