STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THA_1038Alkaline protease A; Belongs to the peptidase S8 family. (560 aa)    
Predicted Functional Partners:
THA_1658
Probable subtilase-type serine protease; Belongs to the peptidase S8 family.
  
  
 
0.925
THA_1040
Putative aminotransferase.
  
    0.559
cobO
cob(I)alamin adenosyltransferase.
       0.504
THA_1701
2',3'-cyclic-nucleotide 2'-phosphodiesterase; Belongs to the 5'-nucleotidase family.
  
  
 0.494
THA_1037
Hypothetical protein.
       0.443
THA_1153
FG-GAP repeat domain protein.
 
 
 0.414
THA_360
Hypothetical protein.
 
 
 0.409
THA_808
Peptidase M16 inactive domain family.
  
  
 0.403
THA_994
Competence/damage-inducible protein CinA N- domain, putative; Belongs to the CinA family.
     
 0.402
Your Current Organism:
Thermosipho africanus
NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B
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