STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiEPrecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit. (199 aa)    
Predicted Functional Partners:
THA_1067
cobalt-precorrin-8X methylmutase.
 
 
 0.999
THA_1070
Decarboxylating precorrin-6Y C5,15-methyltransferase.
 
 0.999
cbiD
Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.986
THA_1073
CbiG.
 
  
 0.977
THA_1071
Precorrin-2 methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.959
cobK
Precorrin-6x reductase.
 
  
 0.953
cobM
Precorrin-4 C11-methyltransferase.
 
  
0.899
cbiX
Sirohydrochlorin cobaltochelatase.
 
   
 0.889
cbiH
Cobalamin biosynthesis protein.
 
  
0.878
THA_1078
Uroporphyrinogen III synthase/methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.871
Your Current Organism:
Thermosipho africanus
NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.