Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
THA_1272 | THA_1273 | THA_1272 | THA_1273 | Ggdef domain/hd domain protein. | Conserved hypothetical protein. | 0.807 |
THA_1272 | THA_1274 | THA_1272 | THA_1274 | Ggdef domain/hd domain protein. | Glycoprotease family. | 0.561 |
THA_1272 | THA_1276 | THA_1272 | THA_1276 | Ggdef domain/hd domain protein. | Conserved hypothetical protein. | 0.531 |
THA_1272 | THA_1277 | THA_1272 | THA_1277 | Ggdef domain/hd domain protein. | Hypothetical protein. | 0.542 |
THA_1272 | THA_1278 | THA_1272 | THA_1278 | Ggdef domain/hd domain protein. | Integrase, catalytic region. | 0.456 |
THA_1272 | THA_1279 | THA_1272 | THA_1279 | Ggdef domain/hd domain protein. | HD domain protein. | 0.524 |
THA_1272 | THA_2035 | THA_1272 | THA_2035 | Ggdef domain/hd domain protein. | Transposase repeat family ISCc3. | 0.459 |
THA_1272 | mutS | THA_1272 | THA_1275 | Ggdef domain/hd domain protein. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.601 |
THA_1273 | THA_1272 | THA_1273 | THA_1272 | Conserved hypothetical protein. | Ggdef domain/hd domain protein. | 0.807 |
THA_1273 | THA_1274 | THA_1273 | THA_1274 | Conserved hypothetical protein. | Glycoprotease family. | 0.563 |
THA_1273 | THA_1276 | THA_1273 | THA_1276 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.531 |
THA_1273 | THA_1277 | THA_1273 | THA_1277 | Conserved hypothetical protein. | Hypothetical protein. | 0.542 |
THA_1273 | THA_1278 | THA_1273 | THA_1278 | Conserved hypothetical protein. | Integrase, catalytic region. | 0.456 |
THA_1273 | THA_1279 | THA_1273 | THA_1279 | Conserved hypothetical protein. | HD domain protein. | 0.400 |
THA_1273 | THA_2035 | THA_1273 | THA_2035 | Conserved hypothetical protein. | Transposase repeat family ISCc3. | 0.459 |
THA_1273 | mutS | THA_1273 | THA_1275 | Conserved hypothetical protein. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.561 |
THA_1274 | THA_1272 | THA_1274 | THA_1272 | Glycoprotease family. | Ggdef domain/hd domain protein. | 0.561 |
THA_1274 | THA_1273 | THA_1274 | THA_1273 | Glycoprotease family. | Conserved hypothetical protein. | 0.563 |
THA_1274 | THA_1276 | THA_1274 | THA_1276 | Glycoprotease family. | Conserved hypothetical protein. | 0.773 |
THA_1274 | THA_1277 | THA_1274 | THA_1277 | Glycoprotease family. | Hypothetical protein. | 0.779 |
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