STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THA_1295endo-beta-N-acetylglucosaminidase. (883 aa)    
Predicted Functional Partners:
THA_1290
Alpha-mannosidase.
 
  
 0.900
THA_1296
Sugar ABC transporter substrate-binding protein.
       0.778
THA_1479
N-acetyl-beta-hexosaminidase.
 
   
 0.661
THA_1294
Inner membrane protein.
       0.603
THA_1291
Putative transcription regulator.
  
    0.592
THA_1293
Sugar ABC transporter permease.
       0.592
THA_830
Membrane spanning protein.
   
    0.574
THA_1292
Unknwon conserved protein.
       0.573
THA_434
Conserved hypothetical protein.
    
 
 0.509
THA_435
Hypothetical protein.
    
 
 0.509
Your Current Organism:
Thermosipho africanus
NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.