Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
THA_1419 | THA_1420 | THA_1419 | THA_1420 | methylmalonyl-CoA epimerase. | Transcriptional regulatory protein. | 0.609 |
THA_1419 | THA_1421 | THA_1419 | THA_1421 | methylmalonyl-CoA epimerase. | Hypothetical protein. | 0.609 |
THA_1419 | THA_1424 | THA_1419 | THA_1424 | methylmalonyl-CoA epimerase. | HD domain protein. | 0.589 |
THA_1419 | THA_1425 | THA_1419 | THA_1425 | methylmalonyl-CoA epimerase. | UBA/THIF-type NAD/FAD binding protein. | 0.522 |
THA_1419 | THA_1426 | THA_1419 | THA_1426 | methylmalonyl-CoA epimerase. | Conserved hypothetical protein. | 0.474 |
THA_1419 | minC | THA_1419 | THA_1423 | methylmalonyl-CoA epimerase. | Probable septum site-determining protein MinC, putative; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.654 |
THA_1419 | secA | THA_1419 | THA_1422 | methylmalonyl-CoA epimerase. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.628 |
THA_1420 | THA_1419 | THA_1420 | THA_1419 | Transcriptional regulatory protein. | methylmalonyl-CoA epimerase. | 0.609 |
THA_1420 | THA_1421 | THA_1420 | THA_1421 | Transcriptional regulatory protein. | Hypothetical protein. | 0.799 |
THA_1420 | THA_1424 | THA_1420 | THA_1424 | Transcriptional regulatory protein. | HD domain protein. | 0.757 |
THA_1420 | THA_1425 | THA_1420 | THA_1425 | Transcriptional regulatory protein. | UBA/THIF-type NAD/FAD binding protein. | 0.624 |
THA_1420 | THA_1426 | THA_1420 | THA_1426 | Transcriptional regulatory protein. | Conserved hypothetical protein. | 0.616 |
THA_1420 | THA_1427 | THA_1420 | THA_1427 | Transcriptional regulatory protein. | Serine/threonine protein phosphatase. | 0.492 |
THA_1420 | THA_1428 | THA_1420 | THA_1428 | Transcriptional regulatory protein. | Permeases of the drug/metabolite transporter. | 0.453 |
THA_1420 | flgB | THA_1420 | THA_1429 | Transcriptional regulatory protein. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.435 |
THA_1420 | minC | THA_1420 | THA_1423 | Transcriptional regulatory protein. | Probable septum site-determining protein MinC, putative; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.798 |
THA_1420 | secA | THA_1420 | THA_1422 | Transcriptional regulatory protein. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.804 |
THA_1421 | THA_1419 | THA_1421 | THA_1419 | Hypothetical protein. | methylmalonyl-CoA epimerase. | 0.609 |
THA_1421 | THA_1420 | THA_1421 | THA_1420 | Hypothetical protein. | Transcriptional regulatory protein. | 0.799 |
THA_1421 | THA_1424 | THA_1421 | THA_1424 | Hypothetical protein. | HD domain protein. | 0.757 |
page 1 of 6