Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
THA_101 | THA_136 | THA_101 | THA_136 | Udk phosphoribulokinase family protein. | Pyrimidine-nucleoside phosphorylase. | 0.920 |
THA_101 | THA_1510 | THA_101 | THA_1510 | Udk phosphoribulokinase family protein. | Udk uridine kinase. | 0.911 |
THA_101 | THA_1701 | THA_101 | THA_1701 | Udk phosphoribulokinase family protein. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Belongs to the 5'-nucleotidase family. | 0.913 |
THA_101 | THA_1775 | THA_101 | THA_1775 | Udk phosphoribulokinase family protein. | Cdd cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.920 |
THA_101 | THA_358 | THA_101 | THA_358 | Udk phosphoribulokinase family protein. | Protein UshA; Belongs to the 5'-nucleotidase family. | 0.906 |
THA_101 | surE | THA_101 | THA_973 | Udk phosphoribulokinase family protein. | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.907 |
THA_136 | THA_101 | THA_136 | THA_101 | Pyrimidine-nucleoside phosphorylase. | Udk phosphoribulokinase family protein. | 0.920 |
THA_136 | THA_1510 | THA_136 | THA_1510 | Pyrimidine-nucleoside phosphorylase. | Udk uridine kinase. | 0.920 |
THA_136 | THA_1701 | THA_136 | THA_1701 | Pyrimidine-nucleoside phosphorylase. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Belongs to the 5'-nucleotidase family. | 0.909 |
THA_136 | THA_1775 | THA_136 | THA_1775 | Pyrimidine-nucleoside phosphorylase. | Cdd cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.989 |
THA_136 | THA_1859 | THA_136 | THA_1859 | Pyrimidine-nucleoside phosphorylase. | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.921 |
THA_136 | THA_358 | THA_136 | THA_358 | Pyrimidine-nucleoside phosphorylase. | Protein UshA; Belongs to the 5'-nucleotidase family. | 0.908 |
THA_136 | THA_957 | THA_136 | THA_957 | Pyrimidine-nucleoside phosphorylase. | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.921 |
THA_136 | surE | THA_136 | THA_973 | Pyrimidine-nucleoside phosphorylase. | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.930 |
THA_136 | tdk | THA_136 | THA_1702 | Pyrimidine-nucleoside phosphorylase. | Tdk thymidine kinase. | 0.937 |
THA_1510 | THA_101 | THA_1510 | THA_101 | Udk uridine kinase. | Udk phosphoribulokinase family protein. | 0.911 |
THA_1510 | THA_136 | THA_1510 | THA_136 | Udk uridine kinase. | Pyrimidine-nucleoside phosphorylase. | 0.920 |
THA_1510 | THA_1701 | THA_1510 | THA_1701 | Udk uridine kinase. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Belongs to the 5'-nucleotidase family. | 0.929 |
THA_1510 | THA_1775 | THA_1510 | THA_1775 | Udk uridine kinase. | Cdd cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.920 |
THA_1510 | THA_358 | THA_1510 | THA_358 | Udk uridine kinase. | Protein UshA; Belongs to the 5'-nucleotidase family. | 0.923 |
page 1 of 5