STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THA_192Oxaloacetate decarboxylase beta chain. (378 aa)    
Predicted Functional Partners:
THA_159
Pyruvate carboxylase subunit B.
 
 
 0.982
THA_190
2-oxoglutarate synthase subunit KorA.
    
 0.979
THA_1416
glutaconyl-CoA decarboxylase subunit gamma.
 
  
 0.957
THA_1470
Phosphoenolpyruvate carboxykinase.
    
 0.925
ppdK
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
  
 
 0.916
THA_1977
2-oxoacid ferredoxin oxidoreductase, alpha subunit.
    
 0.914
THA_1204
Pyk pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.912
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
     
 0.907
vorB
2-oxoglutarate oxidoreductase, alpha subunit.
    
 0.905
THA_519
Pyruvate synthase subunit PorA.
    
 0.905
Your Current Organism:
Thermosipho africanus
NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.