Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
THA_1152 | THA_1611 | Conserved hypothetical protein. | Flagellar export/assembly protein. | 0.722 |
THA_1152 | THA_1625 | Conserved hypothetical protein. | Ggdef domain protein. | 0.665 |
THA_1152 | THA_239 | Conserved hypothetical protein. | PHP domain protein. | 0.691 |
THA_1152 | THA_587 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.467 |
THA_1152 | THA_594 | Conserved hypothetical protein. | O-Antigen Polymerase family. | 0.577 |
THA_1152 | THA_779 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.553 |
THA_1152 | THA_873 | Conserved hypothetical protein. | Polysaccharide export protein, putative. | 0.701 |
THA_1182 | THA_1611 | Protein of unknown function. | Flagellar export/assembly protein. | 0.453 |
THA_1182 | THA_1625 | Protein of unknown function. | Ggdef domain protein. | 0.745 |
THA_1182 | THA_239 | Protein of unknown function. | PHP domain protein. | 0.653 |
THA_1182 | THA_241 | Protein of unknown function. | Conserved hypothetical protein. | 0.584 |
THA_1182 | THA_587 | Protein of unknown function. | Conserved hypothetical protein. | 0.468 |
THA_1182 | THA_593 | Protein of unknown function. | Lipoprotein, putative. | 0.655 |
THA_1182 | THA_594 | Protein of unknown function. | O-Antigen Polymerase family. | 0.750 |
THA_1182 | THA_779 | Protein of unknown function. | Conserved hypothetical protein. | 0.752 |
THA_1182 | THA_873 | Protein of unknown function. | Polysaccharide export protein, putative. | 0.487 |
THA_1611 | THA_1152 | Flagellar export/assembly protein. | Conserved hypothetical protein. | 0.722 |
THA_1611 | THA_1182 | Flagellar export/assembly protein. | Protein of unknown function. | 0.453 |
THA_1611 | THA_1625 | Flagellar export/assembly protein. | Ggdef domain protein. | 0.748 |
THA_1611 | THA_239 | Flagellar export/assembly protein. | PHP domain protein. | 0.685 |
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