STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THA_373MarR-family transcriptional regulator. (150 aa)    
Predicted Functional Partners:
THA_371
ABC-type multidrug/protein/lipid transport system, ATPase.
  
  
 0.811
THA_372
ABC transporter ATP-binding protein.
  
  
 0.810
THA_370
Conserved hypothetical protein.
     
 0.535
THA_374
Alcohol dehydrogenase.
       0.517
THA_369
Copper-translocating P-type ATPase.
     
 0.511
THA_1405
Transcriptional regulator, XRE family.
 
 
 0.479
THA_1109
Cyclic diguanylate phosphodiesterase (EAL) domain protein.
  
  
 0.453
Your Current Organism:
Thermosipho africanus
NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.