STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THA_424L-lysine 2,3-aminomutase. (423 aa)    
Predicted Functional Partners:
THA_428
D-lysine 5,6-aminomutase alpha subunit.
 
  
 0.983
THA_429
D-lysine 5,6-aminomutase beta subunit.
 
  
  0.982
THA_426
Conserved hypothetical protein.
 
     0.839
THA_427
DNA mismatch repair protein MutS.
 
     0.827
THA_423
Alcohol dehydrogenase, zinc-binding.
 
     0.811
THA_421
beta-alanyl-CoA:ammonia lyase 2.
 
   
 0.808
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
  0.800
THA_425
MaoC family protein.
       0.799
THA_422
Conserved hypothetical protein.
     
 0.775
THA_430
Lipoprotein, putative.
       0.773
Your Current Organism:
Thermosipho africanus
NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.