Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
THA_527 | THA_528 | THA_527 | THA_528 | Metal dependent phosphohydrolase. | Hypothetical protein. | 0.841 |
THA_527 | THA_529 | THA_527 | THA_529 | Metal dependent phosphohydrolase. | Membrane protein, putative. | 0.807 |
THA_527 | THA_530 | THA_527 | THA_530 | Metal dependent phosphohydrolase. | Ggdef domain/hd domain protein, putative. | 0.864 |
THA_527 | THA_531 | THA_527 | THA_531 | Metal dependent phosphohydrolase. | Adenylate cyclase. | 0.863 |
THA_527 | THA_532 | THA_527 | THA_532 | Metal dependent phosphohydrolase. | Conserved hypothetical protein; Belongs to the methyltransferase superfamily. | 0.724 |
THA_527 | THA_534 | THA_527 | THA_534 | Metal dependent phosphohydrolase. | Flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family. | 0.709 |
THA_527 | THA_535 | THA_527 | THA_535 | Metal dependent phosphohydrolase. | Conserved hypothetical protein. | 0.671 |
THA_527 | THA_536 | THA_527 | THA_536 | Metal dependent phosphohydrolase. | Negative regulator of flagellin synthesis FlgM. | 0.671 |
THA_527 | THA_537 | THA_527 | THA_537 | Metal dependent phosphohydrolase. | Methyl-accepting chemotaxis protein. | 0.505 |
THA_527 | flgL | THA_527 | THA_533 | Metal dependent phosphohydrolase. | Flagellar hook-associated protein 3. | 0.753 |
THA_528 | THA_527 | THA_528 | THA_527 | Hypothetical protein. | Metal dependent phosphohydrolase. | 0.841 |
THA_528 | THA_529 | THA_528 | THA_529 | Hypothetical protein. | Membrane protein, putative. | 0.799 |
THA_528 | THA_530 | THA_528 | THA_530 | Hypothetical protein. | Ggdef domain/hd domain protein, putative. | 0.799 |
THA_528 | THA_531 | THA_528 | THA_531 | Hypothetical protein. | Adenylate cyclase. | 0.861 |
THA_528 | THA_532 | THA_528 | THA_532 | Hypothetical protein. | Conserved hypothetical protein; Belongs to the methyltransferase superfamily. | 0.724 |
THA_528 | THA_534 | THA_528 | THA_534 | Hypothetical protein. | Flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family. | 0.827 |
THA_528 | THA_535 | THA_528 | THA_535 | Hypothetical protein. | Conserved hypothetical protein. | 0.671 |
THA_528 | THA_536 | THA_528 | THA_536 | Hypothetical protein. | Negative regulator of flagellin synthesis FlgM. | 0.671 |
THA_528 | THA_537 | THA_528 | THA_537 | Hypothetical protein. | Methyl-accepting chemotaxis protein. | 0.458 |
THA_528 | flgL | THA_528 | THA_533 | Hypothetical protein. | Flagellar hook-associated protein 3. | 0.761 |
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