Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THA_620Conserved hypothetical protein. (205 aa)    
Predicted Functional Partners:
THA_618
Alpha-2-macroglobulin family N- region.
 
    0.980
THA_619
Conserved hypothetical protein.
       0.824
THA_1743
Conserved hypothetical protein.
  
     0.771
THA_39
Iron (II) transport protein A.
  
     0.671
THA_865
Glycosyl transferase, group 1 family protein.
  
     0.658
THA_880
Glycosyl transferase, group 1 family protein.
  
     0.641
THA_1349
Galactosyltransferase-related protein.
  
     0.630
THA_597
Conserved hypothetical protein.
  
     0.572
THA_691
Clostripain-related protein.
  
     0.541
THA_587
Conserved hypothetical protein.
  
     0.519
Your Current Organism:
Thermosipho africanus
NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B
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