STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THA_670Ribose import ATP-binding protein RbsA. (492 aa)    
Predicted Functional Partners:
THA_671
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 0.999
THA_672
D-ribose-binding protein.
 0.999
rbsD
High affinity ribose transport protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.990
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.758
THA_229
Sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.704
THA_230
Sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
     0.660
THA_673
Transcriptional regulator, LacI family.
  
  
 0.660
THA_1831
Basic membrane protein.
 
     0.537
THA_227
Basic membrane protein.
 
     0.522
THA_1291
Putative transcription regulator.
  
  
 0.442
Your Current Organism:
Thermosipho africanus
NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.