STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THA_871Conserved hypothetical protein. (358 aa)    
Predicted Functional Partners:
THA_868
Galactoside O-acetyltransferase.
 
     0.866
THA_869
Sugar transaminase, involved in dTDP-4-amino-4,6-dideoxyglucose biosynthesis; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.840
rfbB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
    0.813
THA_866
Lipopolysaccharide biosynthesis protein.
 
    0.812
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
     
 0.792
THA_865
Glycosyl transferase, group 1 family protein.
 
   
 0.770
THA_873
Polysaccharide export protein, putative.
 
     0.746
THA_872
Chain length determinant protein.
 
     0.693
THA_1034
Secretin and TonB N terminus short domain protein.
  
     0.629
THA_71
Serine protease MucD.
   
 0.625
Your Current Organism:
Thermosipho africanus
NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.