STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THA_881Glycosyl transferase, group 1 family protein. (384 aa)    
Predicted Functional Partners:
THA_880
Glycosyl transferase, group 1 family protein.
 
     0.818
THA_879
Succinoglycan biosynthesis protein ExoA.
 
     0.809
THA_882
Integrase, catalytic region.
  
    0.513
THA_2025
Transposase repeat family ISCc3.
       0.506
THA_866
Lipopolysaccharide biosynthesis protein.
 
  
 0.501
THA_878
Hypothetical protein.
       0.465
THA_1351
Glycosyl transferase, group 2 family protein.
 
 
 0.460
THA_889
Bacterial sugar transferase.
 
  
 0.447
THA_873
Polysaccharide export protein, putative.
 
  
 0.436
rfbB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.430
Your Current Organism:
Thermosipho africanus
NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.