STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THA_9Chemotaxis protein MotB, putative. (217 aa)    
Predicted Functional Partners:
THA_8
Viral A-type inclusion protein repeat, putative.
 
    0.938
THA_1701
2',3'-cyclic-nucleotide 2'-phosphodiesterase; Belongs to the 5'-nucleotidase family.
  
 
 0.798
THA_970
Cationic outer membrane protein.
  
 
 0.771
THA_1152
Conserved hypothetical protein.
  
 
 0.759
THA_1743
Conserved hypothetical protein.
  
 
 0.759
THA_1298
Probable outer membrane protein, putative.
  
 
 0.703
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
  
 
 
 0.654
THA_1452
CheA signal transduction histidine kinase, putative.
   
 
 0.652
THA_1843
endonuclease/Exonuclease/phosphatase family protein.
   
  
 0.626
lepB
Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.604
Your Current Organism:
Thermosipho africanus
NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.