Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
THA_1379 | THA_947 | THA_1379 | THA_947 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Exonuclease sbcd. | 0.649 |
THA_1379 | polA | THA_1379 | THA_211 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.653 |
THA_1844 | THA_946 | THA_1844 | THA_946 | RecQ. | Exonuclease sbcc, putative. | 0.864 |
THA_1844 | THA_947 | THA_1844 | THA_947 | RecQ. | Exonuclease sbcd. | 0.906 |
THA_1844 | polA | THA_1844 | THA_211 | RecQ. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.976 |
THA_1844 | recA | THA_1844 | THA_1462 | RecQ. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.915 |
THA_1844 | topA | THA_1844 | THA_1304 | RecQ. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.996 |
THA_1914 | THA_947 | THA_1914 | THA_947 | Oxidoreductase. | Exonuclease sbcd. | 0.649 |
THA_1914 | polA | THA_1914 | THA_211 | Oxidoreductase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.653 |
THA_946 | THA_1844 | THA_946 | THA_1844 | Exonuclease sbcc, putative. | RecQ. | 0.864 |
THA_946 | THA_947 | THA_946 | THA_947 | Exonuclease sbcc, putative. | Exonuclease sbcd. | 0.999 |
THA_946 | THA_948 | THA_946 | THA_948 | Exonuclease sbcc, putative. | Conserved hypothetical protein. | 0.718 |
THA_946 | THA_949 | THA_946 | THA_949 | Exonuclease sbcc, putative. | Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. | 0.689 |
THA_946 | polA | THA_946 | THA_211 | Exonuclease sbcc, putative. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.968 |
THA_946 | recA | THA_946 | THA_1462 | Exonuclease sbcc, putative. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.709 |
THA_946 | topA | THA_946 | THA_1304 | Exonuclease sbcc, putative. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.759 |
THA_947 | THA_1379 | THA_947 | THA_1379 | Exonuclease sbcd. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.649 |
THA_947 | THA_1844 | THA_947 | THA_1844 | Exonuclease sbcd. | RecQ. | 0.906 |
THA_947 | THA_1914 | THA_947 | THA_1914 | Exonuclease sbcd. | Oxidoreductase. | 0.649 |
THA_947 | THA_946 | THA_947 | THA_946 | Exonuclease sbcd. | Exonuclease sbcc, putative. | 0.999 |
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