STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THA_948Conserved hypothetical protein. (212 aa)    
Predicted Functional Partners:
THA_950
Sodium/phosphate symporter.
 
  
 0.965
THA_951
Sodium/phosphate symporter.
 
  
 0.949
THA_216
Sodium/phosphate symporter.
 
  
 0.892
THA_217
Protein of unknown function.
  
     0.768
THA_949
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
       0.741
THA_946
Exonuclease sbcc, putative.
       0.718
THA_947
Exonuclease sbcd.
       0.718
gidA2
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.565
THA_1812
NAD synthase family.
  
     0.434
rpmB
Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.402
Your Current Organism:
Thermosipho africanus
NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.