AJR22481.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

AJR22481.1

Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)

Predicted Functional Partners:

AJR22480.1

0.977

cobS

0.803

AJR24151.1

0.733

AJR24152.1

0.733

AJR22479.1

0.725

AJR24626.1

0.474

AJR24625.1

0.456

AJR26038.1

0.449

AJR23467.1

0.442

AJR23468.1

0.437

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22479.1	AJR22480.1	TZ53_00395	TZ53_00400	citryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
AJR22479.1	AJR22481.1	TZ53_00395	TZ53_00405	citryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
AJR22480.1	AJR22479.1	TZ53_00400	TZ53_00395	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	citryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.	0.725
AJR22480.1	AJR22481.1	TZ53_00400	TZ53_00405	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
AJR22480.1	AJR24151.1	TZ53_00400	TZ53_10835	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.522
AJR22480.1	AJR24152.1	TZ53_00400	TZ53_10840	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.475
AJR22480.1	AJR24625.1	TZ53_00400	TZ53_13710	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protease subunit HflC; HflC and HflK could regulate a protease.	0.693
AJR22480.1	AJR24626.1	TZ53_00400	TZ53_13715	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; HflC and HflK could encode or regulate a protease.	0.676
AJR22481.1	AJR22479.1	TZ53_00405	TZ53_00395	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	citryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.	0.725
AJR22481.1	AJR22480.1	TZ53_00405	TZ53_00400	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
AJR22481.1	AJR23467.1	TZ53_00405	TZ53_06730	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.442
AJR22481.1	AJR23468.1	TZ53_00405	TZ53_06735	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	cobalt-precorrin-6X reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.437
AJR22481.1	AJR24151.1	TZ53_00405	TZ53_10835	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
AJR22481.1	AJR24152.1	TZ53_00405	TZ53_10840	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
AJR22481.1	AJR24625.1	TZ53_00405	TZ53_13710	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protease subunit HflC; HflC and HflK could regulate a protease.	0.456
AJR22481.1	AJR24626.1	TZ53_00405	TZ53_13715	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; HflC and HflK could encode or regulate a protease.	0.474
AJR22481.1	AJR26038.1	TZ53_00405	TZ53_22120	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.449
AJR22481.1	cobS	TZ53_00405	TZ53_06825	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.	0.803
AJR23467.1	AJR22481.1	TZ53_06730	TZ53_00405	Catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.442
AJR23467.1	AJR23468.1	TZ53_06730	TZ53_06735	Catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.	cobalt-precorrin-6X reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987