AJR26064.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

AJR26064.1

RES domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)

Predicted Functional Partners:

AJR26065.1

0.960

AJR24418.1

0.900

AJR22507.1

0.776

AJR26358.1

0.672

parS

0.672

AJR26445.1

0.538

AJR24754.1

0.447

AJR24199.1

0.434

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22507.1	AJR26064.1	TZ53_00595	TZ53_00600	DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.	RES domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
AJR22507.1	AJR26065.1	TZ53_00595	TZ53_00605	DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.615
AJR24199.1	AJR26064.1	TZ53_11150	TZ53_00600	Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	RES domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.434
AJR24199.1	AJR26065.1	TZ53_11150	TZ53_00605	Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.457
AJR24199.1	AJR26445.1	TZ53_11150	TZ53_16065	Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.427
AJR24418.1	AJR26064.1	TZ53_12455	TZ53_00600	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RES domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AJR24754.1	AJR26064.1	TZ53_14495	TZ53_00600	Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	RES domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.447
AJR24754.1	AJR26065.1	TZ53_14495	TZ53_00605	Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.473
AJR24754.1	AJR26445.1	TZ53_14495	TZ53_16065	Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
AJR26064.1	AJR22507.1	TZ53_00600	TZ53_00595	RES domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
AJR26064.1	AJR24199.1	TZ53_00600	TZ53_11150	RES domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.434
AJR26064.1	AJR24418.1	TZ53_00600	TZ53_12455	RES domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AJR26064.1	AJR24754.1	TZ53_00600	TZ53_14495	RES domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.447
AJR26064.1	AJR26065.1	TZ53_00600	TZ53_00605	RES domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
AJR26064.1	AJR26358.1	TZ53_00600	TZ53_12405	RES domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.672
AJR26064.1	AJR26445.1	TZ53_00600	TZ53_16065	RES domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
AJR26064.1	parS	TZ53_00600	TZ53_17665	RES domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. Neutralizes the bacteriostatic effect of cognate toxin ParT by inserting into its active site.	0.672
AJR26065.1	AJR22507.1	TZ53_00605	TZ53_00595	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.615
AJR26065.1	AJR24199.1	TZ53_00605	TZ53_11150	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.457
AJR26065.1	AJR24754.1	TZ53_00605	TZ53_14495	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.473