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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR22555.1Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (609 aa)    
Predicted Functional Partners:
AJR22572.1
MraZ protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.
 
     0.829
AJR26474.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.791
AJR25029.1
Exoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
AJR25135.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
AJR24842.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
AJR24360.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.768
AJR25105.1
Pilus assembly protein TadD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
AJR26091.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
AJR22994.1
protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.763
AJR24068.1
Iron transporter FeoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.762
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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