AJR22598.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

AJR22598.1

ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)

Predicted Functional Partners:

AJR26096.1

0.816

AJR26077.1

0.794

AJR22713.1

0.781

AJR22597.1

0.775

AJR22714.1

0.729

AJR25144.1

0.689

AJR24842.1

0.675

AJR25135.1

0.645

AJR22572.1

0.631

AJR24360.1

0.615

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22572.1	AJR22597.1	TZ53_00970	TZ53_01135	MraZ protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.676
AJR22572.1	AJR22598.1	TZ53_00970	TZ53_01140	MraZ protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.631
AJR22572.1	AJR24360.1	TZ53_00970	TZ53_12085	MraZ protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.772
AJR22572.1	AJR24842.1	TZ53_00970	TZ53_15020	MraZ protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.758
AJR22572.1	AJR25135.1	TZ53_00970	TZ53_16785	MraZ protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
AJR22572.1	AJR25144.1	TZ53_00970	TZ53_16830	MraZ protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.756
AJR22597.1	AJR22572.1	TZ53_01135	TZ53_00970	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MraZ protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.	0.676
AJR22597.1	AJR22598.1	TZ53_01135	TZ53_01140	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
AJR22597.1	AJR24360.1	TZ53_01135	TZ53_12085	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.736
AJR22597.1	AJR24842.1	TZ53_01135	TZ53_15020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.627
AJR22597.1	AJR25135.1	TZ53_01135	TZ53_16785	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.658
AJR22597.1	AJR25144.1	TZ53_01135	TZ53_16830	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.720
AJR22597.1	AJR26077.1	TZ53_01135	TZ53_01145	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.437
AJR22598.1	AJR22572.1	TZ53_01140	TZ53_00970	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MraZ protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.	0.631
AJR22598.1	AJR22597.1	TZ53_01140	TZ53_01135	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
AJR22598.1	AJR22713.1	TZ53_01140	TZ53_01850	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
AJR22598.1	AJR22714.1	TZ53_01140	TZ53_01855	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.729
AJR22598.1	AJR24360.1	TZ53_01140	TZ53_12085	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.615
AJR22598.1	AJR24842.1	TZ53_01140	TZ53_15020	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.675
AJR22598.1	AJR25135.1	TZ53_01140	TZ53_16785	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645