AJR22609.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

AJR22609.1

Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)

Predicted Functional Partners:

AJR22607.1

0.998

AJR22608.1

0.997

AJR22610.1

0.817

AJR23469.1

0.686

AJR23563.1

0.613

AJR23575.1

0.606

AJR24703.1

0.561

AJR23860.1

0.559

AJR25446.1

0.558

AJR23420.1

0.556

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22607.1	AJR22608.1	TZ53_01205	TZ53_01210	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.999
AJR22607.1	AJR22609.1	TZ53_01205	TZ53_01215	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AJR22607.1	AJR22610.1	TZ53_01205	TZ53_01220	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.659
AJR22607.1	AJR23469.1	TZ53_01205	TZ53_06740	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	precorrin-6Y methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.581
AJR22607.1	AJR23563.1	TZ53_01205	TZ53_07365	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AJR22607.1	AJR23575.1	TZ53_01205	TZ53_07460	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.426
AJR22608.1	AJR22607.1	TZ53_01210	TZ53_01205	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22608.1	AJR22609.1	TZ53_01210	TZ53_01215	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AJR22608.1	AJR22610.1	TZ53_01210	TZ53_01220	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.658
AJR22608.1	AJR23420.1	TZ53_01210	TZ53_06440	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.409
AJR22608.1	AJR23469.1	TZ53_01210	TZ53_06740	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	precorrin-6Y methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.576
AJR22608.1	AJR23563.1	TZ53_01210	TZ53_07365	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
AJR22608.1	AJR23575.1	TZ53_01210	TZ53_07460	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AJR22608.1	AJR23860.1	TZ53_01210	TZ53_09105	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
AJR22608.1	AJR25446.1	TZ53_01210	TZ53_18620	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.413
AJR22609.1	AJR22607.1	TZ53_01215	TZ53_01205	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AJR22609.1	AJR22608.1	TZ53_01215	TZ53_01210	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.997
AJR22609.1	AJR22610.1	TZ53_01215	TZ53_01220	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
AJR22609.1	AJR23420.1	TZ53_01215	TZ53_06440	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.556
AJR22609.1	AJR23469.1	TZ53_01215	TZ53_06740	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	precorrin-6Y methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.686