AJR22622.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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textmining

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[Homology]

Score

AJR22622.1

TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)

Predicted Functional Partners:

AJR22621.1

0.678

AJR22620.1

0.638

AJR22623.1

0.605

emrB

0.577

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22620.1	AJR22621.1	TZ53_01280	TZ53_01285	Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
AJR22620.1	AJR22622.1	TZ53_01280	TZ53_01290	Derived by automated computational analysis using gene prediction method: Protein Homology.	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.638
AJR22620.1	AJR22623.1	TZ53_01280	TZ53_01295	Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
AJR22620.1	emrB	TZ53_01280	TZ53_01275	Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	0.986
AJR22621.1	AJR22620.1	TZ53_01285	TZ53_01280	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
AJR22621.1	AJR22622.1	TZ53_01285	TZ53_01290	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678
AJR22621.1	AJR22623.1	TZ53_01285	TZ53_01295	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
AJR22621.1	emrB	TZ53_01285	TZ53_01275	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	0.942
AJR22622.1	AJR22620.1	TZ53_01290	TZ53_01280	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.638
AJR22622.1	AJR22621.1	TZ53_01290	TZ53_01285	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678
AJR22622.1	AJR22623.1	TZ53_01290	TZ53_01295	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.605
AJR22622.1	emrB	TZ53_01290	TZ53_01275	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	0.577
AJR22623.1	AJR22620.1	TZ53_01295	TZ53_01280	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
AJR22623.1	AJR22621.1	TZ53_01295	TZ53_01285	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
AJR22623.1	AJR22622.1	TZ53_01295	TZ53_01290	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.605
AJR22623.1	emrB	TZ53_01295	TZ53_01275	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	0.436
emrB	AJR22620.1	TZ53_01275	TZ53_01280	Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
emrB	AJR22621.1	TZ53_01275	TZ53_01285	Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
emrB	AJR22622.1	TZ53_01275	TZ53_01290	Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
emrB	AJR22623.1	TZ53_01275	TZ53_01295	Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436