Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
AJR22651.1GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)    
Predicted Functional Partners:
AJR23424.1
Cytosolic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.815
AJR22650.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
gpsA
Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
   0.696
smc
Chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
  0.659
AJR24864.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.659
AJR22652.1
Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.643
AJR22649.1
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.503
AJR24822.1
Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.458
AJR25073.1
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.444
AJR26088.1
Sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.426
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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