AJR26089.1 protein (Sphingobium sp. YBL2) - STRING interaction network

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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[Homology]

Score

AJR26089.1

Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)

Predicted Functional Partners:

AJR22850.1

0.750

AJR23286.1

0.708

AJR25139.1

0.694

AJR26516.1

0.537

AJR26021.1

0.533

prs

0.531

AJR25282.1

0.526

AJR25253.1

0.522

AJR26422.1

0.519

AJR26515.1

0.519

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22850.1	AJR25253.1	TZ53_02755	TZ53_17475	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.462
AJR22850.1	AJR26089.1	TZ53_02755	TZ53_01525	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.750
AJR22850.1	AJR26422.1	TZ53_02755	TZ53_15290	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	General secretion pathway protein GspL; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
AJR22850.1	AJR26515.1	TZ53_02755	TZ53_19560	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
AJR22850.1	AJR26516.1	TZ53_02755	TZ53_19595	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.421
AJR23286.1	AJR25139.1	TZ53_05470	TZ53_16805	Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.999
AJR23286.1	AJR25253.1	TZ53_05470	TZ53_17475	Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.799
AJR23286.1	AJR26089.1	TZ53_05470	TZ53_01525	Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
AJR23286.1	prs	TZ53_05470	TZ53_10200	Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.	0.975
AJR25139.1	AJR23286.1	TZ53_16805	TZ53_05470	Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR25139.1	AJR25253.1	TZ53_16805	TZ53_17475	Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.791
AJR25139.1	AJR26089.1	TZ53_16805	TZ53_01525	Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.694
AJR25139.1	prs	TZ53_16805	TZ53_10200	Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.	0.989
AJR25253.1	AJR22850.1	TZ53_17475	TZ53_02755	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.462
AJR25253.1	AJR23286.1	TZ53_17475	TZ53_05470	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.799
AJR25253.1	AJR25139.1	TZ53_17475	TZ53_16805	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.791
AJR25253.1	AJR26089.1	TZ53_17475	TZ53_01525	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.522
AJR25253.1	AJR26515.1	TZ53_17475	TZ53_19560	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.537
AJR25253.1	prs	TZ53_17475	TZ53_10200	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.	0.589
AJR25282.1	AJR26089.1	TZ53_17670	TZ53_01525	Prolyl oligopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.526