AJR22760.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

AJR22760.1

Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)

Predicted Functional Partners:

AJR24019.1

0.432

AJR22419.1

0.420

apt

0.420

AJR24591.1

0.408

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22419.1	AJR22760.1	TZ53_00070	TZ53_02200	Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.420
AJR22419.1	AJR24019.1	TZ53_00070	TZ53_10105	Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclohexadienyl dehydrogenase; Dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
AJR22419.1	AJR24591.1	TZ53_00070	TZ53_13525	Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator PleD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.467
AJR22419.1	apt	TZ53_00070	TZ53_02340	Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.	0.727
AJR22760.1	AJR22419.1	TZ53_02200	TZ53_00070	Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.420
AJR22760.1	AJR24019.1	TZ53_02200	TZ53_10105	Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclohexadienyl dehydrogenase; Dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
AJR22760.1	AJR24591.1	TZ53_02200	TZ53_13525	Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator PleD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
AJR22760.1	apt	TZ53_02200	TZ53_02340	Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.	0.420
AJR24019.1	AJR22419.1	TZ53_10105	TZ53_00070	Cyclohexadienyl dehydrogenase; Dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
AJR24019.1	AJR22760.1	TZ53_10105	TZ53_02200	Cyclohexadienyl dehydrogenase; Dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
AJR24019.1	apt	TZ53_10105	TZ53_02340	Cyclohexadienyl dehydrogenase; Dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.	0.752
AJR24591.1	AJR22419.1	TZ53_13525	TZ53_00070	Response regulator PleD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.467
AJR24591.1	AJR22760.1	TZ53_13525	TZ53_02200	Response regulator PleD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
AJR24591.1	apt	TZ53_13525	TZ53_02340	Response regulator PleD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.	0.446
apt	AJR22419.1	TZ53_02340	TZ53_00070	Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.	Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.727
apt	AJR22760.1	TZ53_02340	TZ53_02200	Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.	Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.420
apt	AJR24019.1	TZ53_02340	TZ53_10105	Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.	Cyclohexadienyl dehydrogenase; Dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.752
apt	AJR24591.1	TZ53_02340	TZ53_13525	Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.	Response regulator PleD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446