AJR26118.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AJR26118.1

Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (859 aa)

Predicted Functional Partners:

AJR24699.1

0.742

AJR23208.1

0.662

AJR25083.1

0.652

AJR23748.1

0.632

AJR26549.1

0.564

AJR24768.1

0.547

AJR25545.1

0.537

AJR26004.1

0.528

AJR24509.1

0.517

AJR24815.1

0.507

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23208.1	AJR23748.1	TZ53_04945	TZ53_08465	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.723
AJR23208.1	AJR24699.1	TZ53_04945	TZ53_14155	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
AJR23208.1	AJR24768.1	TZ53_04945	TZ53_14585	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.491
AJR23208.1	AJR24815.1	TZ53_04945	TZ53_14880	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
AJR23208.1	AJR25083.1	TZ53_04945	TZ53_16470	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.812
AJR23208.1	AJR25545.1	TZ53_04945	TZ53_19215	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
AJR23208.1	AJR26004.1	TZ53_04945	TZ53_21945	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.769
AJR23208.1	AJR26118.1	TZ53_04945	TZ53_02695	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.662
AJR23208.1	AJR26549.1	TZ53_04945	TZ53_21115	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.628
AJR23748.1	AJR23208.1	TZ53_08465	TZ53_04945	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.723
AJR23748.1	AJR24509.1	TZ53_08465	TZ53_13030	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
AJR23748.1	AJR24699.1	TZ53_08465	TZ53_14155	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
AJR23748.1	AJR24768.1	TZ53_08465	TZ53_14585	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
AJR23748.1	AJR24815.1	TZ53_08465	TZ53_14880	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.464
AJR23748.1	AJR25083.1	TZ53_08465	TZ53_16470	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.896
AJR23748.1	AJR25545.1	TZ53_08465	TZ53_19215	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.597
AJR23748.1	AJR26004.1	TZ53_08465	TZ53_21945	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
AJR23748.1	AJR26118.1	TZ53_08465	TZ53_02695	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
AJR23748.1	AJR26549.1	TZ53_08465	TZ53_21115	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.487
AJR24509.1	AJR23748.1	TZ53_13030	TZ53_08465	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795