AJR22869.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene fusions

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[Homology]

Score

AJR22869.1

Sensory transduction regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)

Predicted Functional Partners:

AJR24699.1

0.871

AJR26562.1

0.853

AJR26219.1

0.851

AJR24768.1

0.834

AJR23620.1

0.795

AJR25937.1

0.795

AJR26127.1

0.778

AJR25939.1

0.778

AJR24687.1

0.754

AJR26332.1

0.749

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22869.1	AJR23620.1	TZ53_02885	TZ53_07720	Sensory transduction regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
AJR22869.1	AJR24687.1	TZ53_02885	TZ53_14070	Sensory transduction regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754
AJR22869.1	AJR24699.1	TZ53_02885	TZ53_14155	Sensory transduction regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.871
AJR22869.1	AJR24768.1	TZ53_02885	TZ53_14585	Sensory transduction regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.834
AJR22869.1	AJR25937.1	TZ53_02885	TZ53_21500	Sensory transduction regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
AJR22869.1	AJR25939.1	TZ53_02885	TZ53_21510	Sensory transduction regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
AJR22869.1	AJR26127.1	TZ53_02885	TZ53_02890	Sensory transduction regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
AJR22869.1	AJR26219.1	TZ53_02885	TZ53_06335	Sensory transduction regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.851
AJR22869.1	AJR26332.1	TZ53_02885	TZ53_11245	Sensory transduction regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.749
AJR22869.1	AJR26562.1	TZ53_02885	TZ53_21545	Sensory transduction regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
AJR23620.1	AJR22869.1	TZ53_07720	TZ53_02885	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sensory transduction regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
AJR23620.1	AJR24687.1	TZ53_07720	TZ53_14070	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
AJR23620.1	AJR24699.1	TZ53_07720	TZ53_14155	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
AJR23620.1	AJR24768.1	TZ53_07720	TZ53_14585	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
AJR23620.1	AJR25937.1	TZ53_07720	TZ53_21500	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.715
AJR23620.1	AJR26127.1	TZ53_07720	TZ53_02890	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
AJR23620.1	AJR26219.1	TZ53_07720	TZ53_06335	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.790
AJR23620.1	AJR26332.1	TZ53_07720	TZ53_11245	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
AJR23620.1	AJR26562.1	TZ53_07720	TZ53_21545	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
AJR24687.1	AJR22869.1	TZ53_14070	TZ53_02885	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sensory transduction regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754