AJR22956.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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textmining

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co-expression

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gene fusions

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[Homology]

Score

AJR22956.1

ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)

Predicted Functional Partners:

AJR24131.1

0.865

AJR23677.1

0.857

AJR23943.1

0.838

AJR22547.1

0.813

AJR23620.1

0.760

AJR24699.1

0.724

AJR22955.1

0.723

AJR24768.1

0.722

AJR26127.1

0.669

AJR24134.1

0.651

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22547.1	AJR22956.1	TZ53_00840	TZ53_03425	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
AJR22547.1	AJR23620.1	TZ53_00840	TZ53_07720	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
AJR22547.1	AJR23677.1	TZ53_00840	TZ53_08075	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrogen fixation protein FixL; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
AJR22547.1	AJR23943.1	TZ53_00840	TZ53_09615	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958
AJR22547.1	AJR24131.1	TZ53_00840	TZ53_10720	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.494
AJR22547.1	AJR24134.1	TZ53_00840	TZ53_10740	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.466
AJR22547.1	AJR24699.1	TZ53_00840	TZ53_14155	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
AJR22547.1	AJR24768.1	TZ53_00840	TZ53_14585	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
AJR22547.1	AJR26127.1	TZ53_00840	TZ53_02890	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AJR22955.1	AJR22956.1	TZ53_03420	TZ53_03425	Phage shock protein; Involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.723
AJR22955.1	AJR23620.1	TZ53_03420	TZ53_07720	Phage shock protein; Involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AJR22955.1	AJR24699.1	TZ53_03420	TZ53_14155	Phage shock protein; Involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.895
AJR22955.1	AJR24768.1	TZ53_03420	TZ53_14585	Phage shock protein; Involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.895
AJR22956.1	AJR22547.1	TZ53_03425	TZ53_00840	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
AJR22956.1	AJR22955.1	TZ53_03425	TZ53_03420	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage shock protein; Involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.723
AJR22956.1	AJR23620.1	TZ53_03425	TZ53_07720	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
AJR22956.1	AJR23677.1	TZ53_03425	TZ53_08075	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrogen fixation protein FixL; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.857
AJR22956.1	AJR23943.1	TZ53_03425	TZ53_09615	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.838
AJR22956.1	AJR24131.1	TZ53_03425	TZ53_10720	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.865
AJR22956.1	AJR24134.1	TZ53_03425	TZ53_10740	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.651