AJR22961.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AJR22961.1

TolA protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)

Predicted Functional Partners:

AJR22960.1

0.938

AJR22959.1

0.929

tolB

0.925

AJR22958.1

0.796

AJR22610.1

0.774

pal

0.757

AJR22461.1

0.708

AJR23621.1

0.706

AJR24449.1

0.702

AJR24864.1

0.695

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22461.1	AJR22961.1	TZ53_00295	TZ53_03450	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TolA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
AJR22461.1	AJR24864.1	TZ53_00295	TZ53_15145	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
AJR22461.1	pal	TZ53_00295	TZ53_03460	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidoglycan-binding protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.	0.491
AJR22461.1	tolB	TZ53_00295	TZ53_03455	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.	0.892
AJR22610.1	AJR22961.1	TZ53_01220	TZ53_03450	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	TolA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
AJR22610.1	tolB	TZ53_01220	TZ53_03455	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.	0.735
AJR22958.1	AJR22959.1	TZ53_03435	TZ53_03440	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
AJR22958.1	AJR22960.1	TZ53_03435	TZ53_03445	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biopolymer transporter TolR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
AJR22958.1	AJR22961.1	TZ53_03435	TZ53_03450	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	TolA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.796
AJR22958.1	AJR24449.1	TZ53_03435	TZ53_12665	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.456
AJR22958.1	pal	TZ53_03435	TZ53_03460	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidoglycan-binding protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.	0.674
AJR22958.1	tolB	TZ53_03435	TZ53_03455	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.	0.836
AJR22959.1	AJR22958.1	TZ53_03440	TZ53_03435	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
AJR22959.1	AJR22960.1	TZ53_03440	TZ53_03445	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biopolymer transporter TolR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
AJR22959.1	AJR22961.1	TZ53_03440	TZ53_03450	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	TolA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
AJR22959.1	pal	TZ53_03440	TZ53_03460	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidoglycan-binding protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.	0.924
AJR22959.1	tolB	TZ53_03440	TZ53_03455	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.	0.961
AJR22960.1	AJR22958.1	TZ53_03445	TZ53_03435	Biopolymer transporter TolR; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
AJR22960.1	AJR22959.1	TZ53_03445	TZ53_03440	Biopolymer transporter TolR; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
AJR22960.1	AJR22961.1	TZ53_03445	TZ53_03450	Biopolymer transporter TolR; Derived by automated computational analysis using gene prediction method: Protein Homology.	TolA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.938