STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR22964.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (305 aa)    
Predicted Functional Partners:
AJR22966.1
Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.975
AJR22967.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.906
AJR22965.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.861
AJR26145.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.824
AJR22621.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.677
AJR25643.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.662
AJR23482.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.661
AJR23455.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.658
emrB
Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
 
 
 0.656
AJR26284.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.636
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.