AJR22979.1 protein (Sphingobium sp. YBL2) - STRING interaction network

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[Homology]

Score

AJR22979.1

LSU ribosomal protein L21p; Derived by automated computational analysis using gene prediction method: Protein Homology. (175 aa)

Predicted Functional Partners:

rpsI

0.746

hpf

0.742

purD

0.741

rpsO

0.740

rpsC

0.736

rpsQ

0.735

rpsK

0.731

rpsF

0.728

rpsB

0.723

rpsR

0.719

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22979.1	hpf	TZ53_03555	TZ53_04540	LSU ribosomal protein L21p; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S30; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	0.742
AJR22979.1	purD	TZ53_03555	TZ53_03550	LSU ribosomal protein L21p; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.	0.741
AJR22979.1	rpsB	TZ53_03555	TZ53_14945	LSU ribosomal protein L21p; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.	0.723
AJR22979.1	rpsC	TZ53_03555	TZ53_11330	LSU ribosomal protein L21p; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.736
AJR22979.1	rpsF	TZ53_03555	TZ53_15820	LSU ribosomal protein L21p; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.728
AJR22979.1	rpsI	TZ53_03555	TZ53_11265	LSU ribosomal protein L21p; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.	0.746
AJR22979.1	rpsK	TZ53_03555	TZ53_10865	LSU ribosomal protein L21p; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.731
AJR22979.1	rpsO	TZ53_03555	TZ53_15960	LSU ribosomal protein L21p; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.740
AJR22979.1	rpsQ	TZ53_03555	TZ53_11345	LSU ribosomal protein L21p; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.735
AJR22979.1	rpsR	TZ53_03555	TZ53_15815	LSU ribosomal protein L21p; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.719
hpf	AJR22979.1	TZ53_04540	TZ53_03555	30S ribosomal protein S30; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	LSU ribosomal protein L21p; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.742
hpf	rpsB	TZ53_04540	TZ53_14945	30S ribosomal protein S30; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.	0.979
hpf	rpsC	TZ53_04540	TZ53_11330	30S ribosomal protein S30; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.979
hpf	rpsF	TZ53_04540	TZ53_15820	30S ribosomal protein S30; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.981
hpf	rpsI	TZ53_04540	TZ53_11265	30S ribosomal protein S30; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.	0.983
hpf	rpsK	TZ53_04540	TZ53_10865	30S ribosomal protein S30; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.966
hpf	rpsO	TZ53_04540	TZ53_15960	30S ribosomal protein S30; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.980
hpf	rpsQ	TZ53_04540	TZ53_11345	30S ribosomal protein S30; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.979
hpf	rpsR	TZ53_04540	TZ53_15815	30S ribosomal protein S30; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.978
purD	AJR22979.1	TZ53_03550	TZ53_03555	Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.	LSU ribosomal protein L21p; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741