STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR22981.1Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)    
Predicted Functional Partners:
AJR26297.1
Xanthan lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
AJR25881.1
Xylose ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.607
AJR22980.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
AJR23962.1
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
AJR26428.1
Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.496
AJR26238.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.461
AJR23946.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.461
AJR26516.1
Beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.457
AJR23524.1
Dimethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
AJR23626.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.438
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.