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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR22988.1Protein-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)    
Predicted Functional Partners:
AJR22987.1
Protein-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.801
AJR24720.1
Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.791
AJR22986.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.786
smc
Chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
  
 0.746
AJR22633.1
Disulfide bond formation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.706
AJR26368.1
DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.632
recO
DNA recombination protein RecO; Involved in DNA repair and RecF pathway recombination.
 
    0.612
AJR22984.1
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.
       0.606
AJR22985.1
Adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.606
AJR25463.1
DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.
 
     0.562
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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