STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR23000.1Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1245 aa)    
Predicted Functional Partners:
AJR23001.1
Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.840
AJR23002.1
ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.823
AJR25565.1
Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.706
AJR25573.1
Cadherin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.700
AJR25564.1
ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.645
AJR23430.1
Autotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.631
AJR26450.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.580
AJR25064.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.570
AJR22801.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
 
 0.539
AJR23712.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.538
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.