STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR23018.1Amylovoran biosynthesis protein AmsD; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)    
Predicted Functional Partners:
AJR23023.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.861
AJR23020.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.839
AJR23019.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.813
AJR23022.1
Carbamoyl phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.806
AJR23021.1
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.776
AJR23437.1
Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.692
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.692
AJR23003.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.673
AJR23014.1
Nucleotide sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.665
AJR23015.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.658
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.