Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
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[Homology]
Score
AJR23019.1Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)    
Predicted Functional Partners:
AJR23018.1
Amylovoran biosynthesis protein AmsD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.799
AJR23020.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.799
AJR23023.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.790
AJR23021.1
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.787
AJR23022.1
Carbamoyl phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
AJR23016.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.635
AJR23017.1
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.575
AJR23112.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.569
AJR25339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.565
AJR23011.1
methionyl-tRNA formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.498
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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