AJR23061.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

AJR23061.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)

Predicted Functional Partners:

AJR23064.1

0.571

AJR23062.1

0.566

AJR23063.1

0.566

AJR23065.1

0.566

AJR23066.1

0.566

AJR23067.1

0.566

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23061.1	AJR23062.1	TZ53_04075	TZ53_04080	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
AJR23061.1	AJR23063.1	TZ53_04075	TZ53_04085	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
AJR23061.1	AJR23064.1	TZ53_04075	TZ53_04090	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.571
AJR23061.1	AJR23065.1	TZ53_04075	TZ53_04095	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
AJR23061.1	AJR23066.1	TZ53_04075	TZ53_04100	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
AJR23061.1	AJR23067.1	TZ53_04075	TZ53_04105	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	SDR-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.566
AJR23062.1	AJR23061.1	TZ53_04080	TZ53_04075	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
AJR23062.1	AJR23063.1	TZ53_04080	TZ53_04085	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
AJR23062.1	AJR23064.1	TZ53_04080	TZ53_04090	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AJR23062.1	AJR23065.1	TZ53_04080	TZ53_04095	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.891
AJR23062.1	AJR23066.1	TZ53_04080	TZ53_04100	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.821
AJR23062.1	AJR23067.1	TZ53_04080	TZ53_04105	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	SDR-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.786
AJR23063.1	AJR23061.1	TZ53_04085	TZ53_04075	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
AJR23063.1	AJR23062.1	TZ53_04085	TZ53_04080	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
AJR23063.1	AJR23064.1	TZ53_04085	TZ53_04090	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AJR23063.1	AJR23065.1	TZ53_04085	TZ53_04095	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.940
AJR23063.1	AJR23066.1	TZ53_04085	TZ53_04100	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
AJR23063.1	AJR23067.1	TZ53_04085	TZ53_04105	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	SDR-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.811
AJR23064.1	AJR23061.1	TZ53_04090	TZ53_04075	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.571
AJR23064.1	AJR23062.1	TZ53_04090	TZ53_04080	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773