AJR23077.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AJR23077.1

Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)

Predicted Functional Partners:

AJR23297.1

0.900

AJR23076.1

0.812

AJR23075.1

0.789

AJR23074.1

0.772

AJR23073.1

0.747

AJR25673.1

0.738

AJR23072.1

0.698

AJR25358.1

0.665

AJR23069.1

0.532

AJR23070.1

0.528

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23069.1	AJR23070.1	TZ53_04115	TZ53_04120	2-deoxy-D-gluconate 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
AJR23069.1	AJR23072.1	TZ53_04115	TZ53_04130	2-deoxy-D-gluconate 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.414
AJR23069.1	AJR23073.1	TZ53_04115	TZ53_04135	2-deoxy-D-gluconate 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.509
AJR23069.1	AJR23074.1	TZ53_04115	TZ53_04140	2-deoxy-D-gluconate 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.557
AJR23069.1	AJR23075.1	TZ53_04115	TZ53_04145	2-deoxy-D-gluconate 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	0.481
AJR23069.1	AJR23076.1	TZ53_04115	TZ53_04150	2-deoxy-D-gluconate 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.539
AJR23069.1	AJR23077.1	TZ53_04115	TZ53_04155	2-deoxy-D-gluconate 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.532
AJR23070.1	AJR23069.1	TZ53_04120	TZ53_04115	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-deoxy-D-gluconate 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
AJR23070.1	AJR23072.1	TZ53_04120	TZ53_04130	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
AJR23070.1	AJR23073.1	TZ53_04120	TZ53_04135	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
AJR23070.1	AJR23074.1	TZ53_04120	TZ53_04140	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.578
AJR23070.1	AJR23075.1	TZ53_04120	TZ53_04145	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	0.546
AJR23070.1	AJR23076.1	TZ53_04120	TZ53_04150	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.539
AJR23070.1	AJR23077.1	TZ53_04120	TZ53_04155	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
AJR23072.1	AJR23069.1	TZ53_04130	TZ53_04115	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-deoxy-D-gluconate 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.414
AJR23072.1	AJR23070.1	TZ53_04130	TZ53_04120	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
AJR23072.1	AJR23073.1	TZ53_04130	TZ53_04135	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
AJR23072.1	AJR23074.1	TZ53_04130	TZ53_04140	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.807
AJR23072.1	AJR23075.1	TZ53_04130	TZ53_04145	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	0.870
AJR23072.1	AJR23076.1	TZ53_04130	TZ53_04150	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.726