AJR23102.1 protein (Sphingobium sp. YBL2) - STRING interaction network

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[Homology]

Score

AJR23102.1

RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)

Predicted Functional Partners:

rpoB

0.709

rpoC

0.706

rpoZ

0.687

rpoA

0.660

AJR23101.1

0.610

AJR24699.1

0.570

AJR24131.1

0.452

AJR24441.1

0.438

AJR24458.1

0.438

AJR24949.1

0.438

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23101.1	AJR23102.1	TZ53_04275	TZ53_04280	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
AJR23102.1	AJR23101.1	TZ53_04280	TZ53_04275	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
AJR23102.1	AJR24131.1	TZ53_04280	TZ53_10720	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.452
AJR23102.1	AJR24441.1	TZ53_04280	TZ53_12600	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
AJR23102.1	AJR24458.1	TZ53_04280	TZ53_12710	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
AJR23102.1	AJR24699.1	TZ53_04280	TZ53_14155	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.570
AJR23102.1	AJR24949.1	TZ53_04280	TZ53_15680	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
AJR23102.1	rpoA	TZ53_04280	TZ53_10860	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.660
AJR23102.1	rpoB	TZ53_04280	TZ53_13660	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.709
AJR23102.1	rpoC	TZ53_04280	TZ53_13655	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.706
AJR23102.1	rpoZ	TZ53_04280	TZ53_08445	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.687
AJR24131.1	AJR23102.1	TZ53_10720	TZ53_04280	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.452
AJR24131.1	AJR24699.1	TZ53_10720	TZ53_14155	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.462
AJR24131.1	rpoA	TZ53_10720	TZ53_10860	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.967
AJR24131.1	rpoB	TZ53_10720	TZ53_13660	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.963
AJR24131.1	rpoC	TZ53_10720	TZ53_13655	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.963
AJR24131.1	rpoZ	TZ53_10720	TZ53_08445	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.960
AJR24441.1	AJR23102.1	TZ53_12600	TZ53_04280	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
AJR24458.1	AJR23102.1	TZ53_12710	TZ53_04280	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
AJR24458.1	AJR24949.1	TZ53_12710	TZ53_15680	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.443